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| author |   Petar Petrov <ppetrov@paju.oulu.fi> | 2013-07-06 01:22:06 -0500 |
|---|---|---|
| committer |   Niels Horn <niels.horn@slackbuilds.org> | 2013-07-07 09:11:53 -0300 |
| commit | d2c42f9118a01a2164bdf11c406986b7f3a95811 (patch) | |
| tree | 76c38cab353550d6fa978227bc51d954200b8e22 /academic/jalview/jalview | |
| parent | 86c1caa9147a66993a4e61eea6166582d766a968 (diff) | |
| download | slackbuilds-d2c42f9118a01a2164bdf11c406986b7f3a95811.tar.gz slackbuilds-d2c42f9118a01a2164bdf11c406986b7f3a95811.tar.xz | |
academic/jalview: Added (A Sequence Alignment Editor and Viewer)
Signed-off-by: Robby Workman <rworkman@slackbuilds.org>
Diffstat (limited to 'academic/jalview/jalview')
| -rw-r--r-- | academic/jalview/jalview | 16 |
1 files changed, 16 insertions, 0 deletions
diff --git a/academic/jalview/jalview b/academic/jalview/jalview new file mode 100644 index 0000000000..31813c2c2a --- /dev/null +++ b/academic/jalview/jalview @@ -0,0 +1,16 @@ +#!/bin/sh + +# This wrapper script is taken from Arch Linux AUR entry of jalview. +# https://aur.archlinux.org/packages/jalview/ +# Maintainer of the PKGBUILD is Stefan Seemayer. + +progname="jalview" +mainclass="jalview.bin.Jalview" +basedir="/usr/share/java/$progname" + +# build classpath: all jars in $basedir +cp=$( ls $basedir/*.jar | xargs echo | sed "s/ /:/g" ); + + +# run jar +"$JAVA_HOME/bin/java" -cp $cp $mainclass |