diff options
Diffstat (limited to 'academic')
30 files changed, 82 insertions, 120 deletions
diff --git a/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild b/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild index 9a04eb6fc4..7ef6e2ceba 100644 --- a/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild +++ b/academic/Gridcoin-Research/Gridcoin-Research.SlackBuild @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=Gridcoin-Research -VERSION=${VERSION:-5.4.7.0} +VERSION=${VERSION:-5.4.8.0} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} diff --git a/academic/Gridcoin-Research/Gridcoin-Research.info b/academic/Gridcoin-Research/Gridcoin-Research.info index a28295c32f..8db3ea0b94 100644 --- a/academic/Gridcoin-Research/Gridcoin-Research.info +++ b/academic/Gridcoin-Research/Gridcoin-Research.info @@ -1,8 +1,8 @@ PRGNAM="Gridcoin-Research" -VERSION="5.4.7.0" +VERSION="5.4.8.0" HOMEPAGE="https://gridcoin.us/" -DOWNLOAD="https://github.com/gridcoin-community/Gridcoin-Research/archive/5.4.7.0/Gridcoin-Research-5.4.7.0.tar.gz" -MD5SUM="8c42dfd8deaa754d78aa248785e724b0" +DOWNLOAD="https://github.com/gridcoin-community/Gridcoin-Research/archive/5.4.8.0/Gridcoin-Research-5.4.8.0.tar.gz" +MD5SUM="69a861f7eca09f6142c8e737744ad9fd" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="" diff --git a/academic/Gridcoin-Research/README b/academic/Gridcoin-Research/README index 2fc9a1a4f5..53cc2f8645 100644 --- a/academic/Gridcoin-Research/README +++ b/academic/Gridcoin-Research/README @@ -34,6 +34,6 @@ release notes on https://github.com/gridcoin-community/Gridcoin-Research/releases ** NOTE: ** -This is a MANDATORY upgrade for versions 5.4.5 and below to fix an +While this is a LEISURE update, you are highly encouraged to upgrade. +Included are additonal fixes and improvements releated to the recent inadvertent fork as a result of an inadvertent protocol change. -If you are already on 5.4.6 this upgrade is "leisure." diff --git a/academic/R/R.SlackBuild b/academic/R/R.SlackBuild index 3ee98369fc..97b5d3a22b 100644 --- a/academic/R/R.SlackBuild +++ b/academic/R/R.SlackBuild @@ -26,7 +26,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=R -VERSION=${VERSION:-4.3.3} +VERSION=${VERSION:-4.4.0} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} diff --git a/academic/R/R.info b/academic/R/R.info index 45cf892f94..6c12168093 100644 --- a/academic/R/R.info +++ b/academic/R/R.info @@ -1,8 +1,8 @@ PRGNAM="R" -VERSION="4.3.3" +VERSION="4.4.0" HOMEPAGE="https://www.r-project.org/" -DOWNLOAD="https://cran.r-project.org/src/base/R-4/R-4.3.3.tar.xz" -MD5SUM="5602f5996107c346dba12a16e866d2e2" +DOWNLOAD="https://cran.r-project.org/src/base/R-4/R-4.4.0.tar.xz" +MD5SUM="647ef3e012e9cf36a187db64a6082217" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="" diff --git a/academic/bcftools/bcftools.SlackBuild b/academic/bcftools/bcftools.SlackBuild index b7a8433557..ad6f5d7181 100644 --- a/academic/bcftools/bcftools.SlackBuild +++ b/academic/bcftools/bcftools.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for bcftools -# Copyright 2017-2023 Rob van Nues # All rights reserved. +# Copyright 2017-2024 Rob van Nues # All rights reserved. # # Redistribution and use of this script, with or without modification, is # permitted provided that the following conditions are met: @@ -24,8 +24,8 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=bcftools -VERSION=${VERSION:-1.19} -HTSLIBV=${HTSLIBV:-1.19} +VERSION=${VERSION:-1.20} +HTSLIBV=${HTSLIBV:-1.20} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} diff --git a/academic/bcftools/bcftools.info b/academic/bcftools/bcftools.info index 1998ed001c..84e5bb039b 100644 --- a/academic/bcftools/bcftools.info +++ b/academic/bcftools/bcftools.info @@ -1,8 +1,8 @@ PRGNAM="bcftools" -VERSION="1.19" +VERSION="1.20" HOMEPAGE="http://www.htslib.org" -DOWNLOAD="https://github.com/samtools/bcftools/releases/download/1.19/bcftools-1.19.tar.bz2" -MD5SUM="9b4e8be279024d19f36bbaad1d2bdb41" +DOWNLOAD="https://github.com/samtools/bcftools/releases/download/1.20/bcftools-1.20.tar.bz2" +MD5SUM="5cfb124c7d9e4db6c5a4e6080a2f27f8" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="htslib" diff --git a/academic/copasi/copasi.SlackBuild b/academic/copasi/copasi.SlackBuild index 0a6da4fcfd..732cd916d9 100644 --- a/academic/copasi/copasi.SlackBuild +++ b/academic/copasi/copasi.SlackBuild @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=copasi -VERSION=${VERSION:-4.42.284} +VERSION=${VERSION:-4.43.288} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} diff --git a/academic/copasi/copasi.info b/academic/copasi/copasi.info index 75e1b966a6..2840e1662d 100644 --- a/academic/copasi/copasi.info +++ b/academic/copasi/copasi.info @@ -1,10 +1,10 @@ PRGNAM="copasi" -VERSION="4.42.284" +VERSION="4.43.288" HOMEPAGE="https://copasi.org" -DOWNLOAD="https://github.com/copasi/COPASI/releases/download/Build-284/COPASI-4.42.284-Linux-32bit.sh" -MD5SUM="66ae94a23f8d7745835e3639f1c567f6" -DOWNLOAD_x86_64="https://github.com/copasi/COPASI/releases/download/Build-284/COPASI-4.42.284-Linux-64bit.sh" -MD5SUM_x86_64="87f09230f64ea4c69a6695963e4f2594" +DOWNLOAD="https://github.com/copasi/COPASI/releases/download/Build-288/COPASI-4.43.288-Linux-32bit.sh" +MD5SUM="2eb1afccd0697ab7b75a1177e89ce15b" +DOWNLOAD_x86_64="https://github.com/copasi/COPASI/releases/download/Build-288/COPASI-4.43.288-Linux-64bit.sh" +MD5SUM_x86_64="cf48d9dd2672f1ba676ddc457b71c91d" REQUIRES="" MAINTAINER="Pedro Mendes" EMAIL="pedro@gepasi.org" diff --git a/academic/fet/fet.SlackBuild b/academic/fet/fet.SlackBuild index 6962abec49..44e787e45d 100644 --- a/academic/fet/fet.SlackBuild +++ b/academic/fet/fet.SlackBuild @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=fet -VERSION=${VERSION:-6.19.3} +VERSION=${VERSION:-6.19.5} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} diff --git a/academic/fet/fet.info b/academic/fet/fet.info index 2093219a59..d18c2b5bff 100644 --- a/academic/fet/fet.info +++ b/academic/fet/fet.info @@ -1,8 +1,8 @@ PRGNAM="fet" -VERSION="6.19.3" +VERSION="6.19.5" HOMEPAGE="https://www.lalescu.ro/liviu/fet/" -DOWNLOAD="https://www.lalescu.ro/liviu/fet/download/fet-6.19.3.tar.bz2" -MD5SUM="5af48c9d1fdf303d7f2ed8ec306a257d" +DOWNLOAD="https://www.lalescu.ro/liviu/fet/download/fet-6.19.5.tar.bz2" +MD5SUM="f950f70c9a697fa3ddec344b562a4037" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="" diff --git a/academic/gri/UTF8patch.README b/academic/gri/UTF8patch.README deleted file mode 100644 index f30c7c969b..0000000000 --- a/academic/gri/UTF8patch.README +++ /dev/null @@ -1,19 +0,0 @@ -Compilation of gri breaks on doc/gri.texi with current tex-info. - -"It is because Texinfo 6.7 changed the default input encoding to UTF-8 -and the input is in ISO-8859-1. The easiest way to fix this would be to -convert the input file to UTF-8, but you could also add -"@documentencoding ISO-8859-1" to the file." -(from email correspondence with texinfo developers) - -The patchfile 'gri-texinfo-6.7patch.txt' set the whole file to ISO-8859-1 -and does not alter the contributor's name. - - -The other patchfile, 'texinfo-utf8.patch', was generated by Matteo Bernardini -(http://cgit.ponce.cc/slackbuilds/commit/?h=gri), and changes the accented o in the name. - -Either patch allows compilation of gri. - -see: -https://www.linuxquestions.org/questions/slackware-14/sbo-scripts-not-building-on-current-read-1st-post-pls-4175561999/page142.html#post6049662
\ No newline at end of file diff --git a/academic/gri/gri-texinfo-6.7patch.txt b/academic/gri/gri-texinfo-6.7patch.txt deleted file mode 100644 index f9b2dedf91..0000000000 --- a/academic/gri/gri-texinfo-6.7patch.txt +++ /dev/null @@ -1,10 +0,0 @@ -diff -Naur gri-2.12.23/doc/gri.texi gri-2.12.23-new/doc/gri.texi ---- gri-2.12.23/doc/gri.texi 2017-08-24 15:31:52.000000000 +0100 -+++ gri-2.12.23-new/doc/gri.texi 2019-10-22 16:13:33.476840964 +0100 -@@ -1,5 +1,5 @@ - \input texinfo -- -+@documentencoding ISO-8859-1 - @c - @comment *** Start of HTML stuff *** - @comment # HTML support, via comments in texinfo: diff --git a/academic/gri/gri.SlackBuild b/academic/gri/gri.SlackBuild index baa6a4e266..a611905cbe 100644 --- a/academic/gri/gri.SlackBuild +++ b/academic/gri/gri.SlackBuild @@ -2,7 +2,7 @@ # Slackware build script for gri -# Copyright 2018-2019 Rob van Nues +# Copyright 2018-2024 Rob van Nues # All rights reserved. # # Redistribution and use of this script, with or without modification, is @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=gri -VERSION=${VERSION:-2.12.23} +VERSION=${VERSION:-2.12.27} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} @@ -38,9 +38,6 @@ if [ -z "$ARCH" ]; then esac fi -# If the variable PRINT_PACKAGE_NAME is set, then this script will report what -# the name of the created package would be, and then exit. This information -# could be useful to other scripts. if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE" exit 0 @@ -79,10 +76,6 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; -#with thanks to Gavin Smith -patch -p1 < $CWD/gri-texinfo-6.7patch.txt -#with thanks to Matteo Bernardini -#patch -p1 < $CWD/texinfo-utf8.patch aclocal autoconf @@ -96,8 +89,6 @@ CXXFLAGS="$SLKCFLAGS" \ --docdir=/usr/doc/$PRGNAM-$VERSION \ --build=$ARCH-slackware-linux -#with thanks to Matteo Bernardini -#see: https://www.linuxquestions.org/questions/slackware-14/sbo-scripts-not-building-on-current-read-1st-post-pls-4175561999/page142.html#post6049662 make -j1 make -j1 install DESTDIR=$PKG @@ -116,7 +107,7 @@ rm $PKG/usr/info/*.info-[1-3] mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION cp -a \ - AUTHORS AUTHOR-NOTES ChangeLog THANKS README NEWS INSTALL DISCUSSION-error-levels COPYING copyright.txt \ + AUTHORS AUTHOR-NOTES ChangeLog THANKS README NEWS DISCUSSION-error-levels COPYING copyright.txt \ $PKG/usr/doc/$PRGNAM-$VERSION cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild diff --git a/academic/gri/gri.info b/academic/gri/gri.info index 6e4ee42dde..df28f646ba 100644 --- a/academic/gri/gri.info +++ b/academic/gri/gri.info @@ -1,8 +1,8 @@ PRGNAM="gri" -VERSION="2.12.23" +VERSION="2.12.27" HOMEPAGE="https://sourceforge.net/p/gri/wiki/Home/" -DOWNLOAD="https://github.com/dankelley/gri/archive/v2.12.23/gri-2.12.23.tar.gz" -MD5SUM="7594140fdd1ea1ccf890c2d7ede0e1e9" +DOWNLOAD="https://sourceforge.net/projects/slackbuildsdirectlinks/files/gri/gri-2.12.27.tar.gz" +MD5SUM="30579bafcfe274939c0c50cb9d66a7d0" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="" diff --git a/academic/gri/texinfo-utf8.patch b/academic/gri/texinfo-utf8.patch deleted file mode 100644 index b63573de33..0000000000 --- a/academic/gri/texinfo-utf8.patch +++ /dev/null @@ -1,12 +0,0 @@ -diff -Naur gri-2.12.23.orig/doc/gri.texi gri-2.12.23/doc/gri.texi ---- gri-2.12.23.orig/doc/gri.texi 2017-08-24 16:31:52.000000000 +0200 -+++ gri-2.12.23/doc/gri.texi 2019-10-22 15:39:51.666151000 +0200 -@@ -19277,7 +19277,7 @@ - Thomas Larsen, - @cindex Thomas Larsen (contributor) - @cindex contributor, Thomas Larsen --Alejandro L�pez-Valencia, -+Alejandro Lopez-Valencia, - @cindex Alejandro Lopez-Valencia (contributor) - @cindex contributor, Alejandro Lopez-Valencia - Kawamura Masao,
\ No newline at end of file diff --git a/academic/magic/magic.SlackBuild b/academic/magic/magic.SlackBuild index 73f7640cfc..241f4f9e2e 100644 --- a/academic/magic/magic.SlackBuild +++ b/academic/magic/magic.SlackBuild @@ -2,6 +2,8 @@ # Slackware build script for magic # Written by Mauricio Martinez <eigenfilter {at} gmail [dot] com> +# +# Updated 05/01/2024 by Alfredo Tomasini <alto . tom @ gmail . com > # THIS SOFTWARE IS PROVIDED BY THE AUTHOR "AS IS" AND ANY EXPRESS OR IMPLIED # WARRANTIES, INCLUDING, BUT NOT LIMITED TO, THE IMPLIED WARRANTIES OF @@ -17,7 +19,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=magic -VERSION=${VERSION:-8.0.211} +VERSION=${VERSION:-8.3.474} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} @@ -30,9 +32,6 @@ if [ -z "$ARCH" ]; then esac fi -# If the variable PRINT_PACKAGE_NAME is set, then this script will report what -# the name of the created package would be, and then exit. This information -# could be useful to other scripts. if [ ! -z "${PRINT_PACKAGE_NAME}" ]; then echo "$PRGNAM-$VERSION-$ARCH-$BUILD$TAG.$PKGTYPE" exit 0 @@ -71,6 +70,18 @@ find -L . \ \( -perm 666 -o -perm 664 -o -perm 640 -o -perm 600 -o -perm 444 \ -o -perm 440 -o -perm 400 \) -exec chmod 644 {} \; +# change the final installation from /usr/lib to usr/lib64 +if [[ "$VERSION" =~ "8.3" ]] && [ "$ARCH" = "x86_64" ] +then +sed -i ' +/^ *INSTALL_LIBDIR *= /{ +s#.*## +i\ +INSTALL_LIBDIR = @DIST_DIR@/lib64 +} ' scripts/defs.mak.in +fi +# exit + CFLAGS="$SLKCFLAGS" \ CXXFLAGS="$SLKCFLAGS" \ ./configure \ @@ -88,8 +99,11 @@ make install DESTDIR=$PKG find $PKG -print0 | xargs -0 file | grep -e "executable" -e "shared object" | grep ELF \ | cut -f 1 -d : | xargs strip --strip-unneeded 2> /dev/null || true +mv $PKG/usr/share/man $PKG/usr/ find $PKG/usr/man -type f -exec gzip -9 {} \; for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done +chmod -R 0644 $PKG/usr/man/*/*.gz +rm -rf $PKG/usr/share mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION cp -a doc/* $PKG/usr/doc/$PRGNAM-$VERSION diff --git a/academic/magic/magic.info b/academic/magic/magic.info index 5dba84cc65..13a82a5f60 100644 --- a/academic/magic/magic.info +++ b/academic/magic/magic.info @@ -1,8 +1,8 @@ PRGNAM="magic" -VERSION="8.0.211" +VERSION="8.3.474" HOMEPAGE="http://opencircuitdesign.com/magic/" -DOWNLOAD="http://opencircuitdesign.com/magic/archive/magic-8.0.211.tgz" -MD5SUM="caa066a415fe219afab7a80c5948ac49" +DOWNLOAD="http://opencircuitdesign.com/magic/archive/magic-8.3.474.tgz" +MD5SUM="6aabec0c7727f774af49bbb6abb2bdab" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="" diff --git a/academic/openboard/openboard.SlackBuild b/academic/openboard/openboard.SlackBuild index d244896916..46af39058c 100644 --- a/academic/openboard/openboard.SlackBuild +++ b/academic/openboard/openboard.SlackBuild @@ -26,7 +26,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=openboard SRCNAM=OpenBoard -VERSION=${VERSION:-1.7.0} +VERSION=${VERSION:-1.7.1} SRCVER=$(echo $VERSION | tr _ -) BUILD=${BUILD:-1} TAG=${TAG:-_SBo} diff --git a/academic/openboard/openboard.info b/academic/openboard/openboard.info index 20a8614784..a21a6369a0 100644 --- a/academic/openboard/openboard.info +++ b/academic/openboard/openboard.info @@ -1,8 +1,8 @@ PRGNAM="openboard" -VERSION="1.7.0" +VERSION="1.7.1" HOMEPAGE="https://github.com/OpenBoard-org/OpenBoard/" -DOWNLOAD="https://github.com/OpenBoard-org/OpenBoard/archive/v1.7.0/OpenBoard-1.7.0.tar.gz" -MD5SUM="8e4b9780efffbd1adca5582fa161fd7e" +DOWNLOAD="https://github.com/OpenBoard-org/OpenBoard/archive/v1.7.1/OpenBoard-1.7.1.tar.gz" +MD5SUM="338d19d5fd281bf3c9a3bdfa51c2d241" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="libpaper libass x264 libfdk-aac" diff --git a/academic/plus42/plus42.SlackBuild b/academic/plus42/plus42.SlackBuild index c89279a774..4901b8843b 100644 --- a/academic/plus42/plus42.SlackBuild +++ b/academic/plus42/plus42.SlackBuild @@ -26,7 +26,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=plus42 -VERSION=${VERSION:-1.1.9} +VERSION=${VERSION:-1.1.10} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} diff --git a/academic/plus42/plus42.info b/academic/plus42/plus42.info index 45e08e71d5..f15c8dccc2 100644 --- a/academic/plus42/plus42.info +++ b/academic/plus42/plus42.info @@ -1,8 +1,8 @@ PRGNAM="plus42" -VERSION="1.1.9" +VERSION="1.1.10" HOMEPAGE="https://www.thomasokken.com/plus42" -DOWNLOAD="https://github.com/thomasokken/plus42desktop/archive/v1.1.9/plus42-1.1.9.tar.gz" -MD5SUM="a06f497124bc6b0e03d2f46c15097faa" +DOWNLOAD="https://github.com/thomasokken/plus42desktop/archive/v1.1.10/plus42-1.1.10.tar.gz" +MD5SUM="9c2731bf823967f55d3b51130dd205e6" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="" diff --git a/academic/pspp/pspp.SlackBuild b/academic/pspp/pspp.SlackBuild index 17b31eb664..efd42d80ce 100644 --- a/academic/pspp/pspp.SlackBuild +++ b/academic/pspp/pspp.SlackBuild @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=pspp -VERSION=${VERSION:-2.0.0} +VERSION=${VERSION:-2.0.1} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} diff --git a/academic/pspp/pspp.info b/academic/pspp/pspp.info index 702e496e28..7c293f4bc2 100644 --- a/academic/pspp/pspp.info +++ b/academic/pspp/pspp.info @@ -1,8 +1,8 @@ PRGNAM="pspp" -VERSION="2.0.0" +VERSION="2.0.1" HOMEPAGE="http://www.gnu.org/software/pspp/" -DOWNLOAD="http://mirrors.nav.ro/gnu/pspp/pspp-2.0.0.tar.gz" -MD5SUM="11f5949311bfe66a44999b9d7db6c99b" +DOWNLOAD="http://mirrors.nav.ro/gnu/pspp/pspp-2.0.1.tar.gz" +MD5SUM="0933860d7d511dac67277ef4829263ce" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="spread-sheet-widget" diff --git a/academic/samtools/samtools.SlackBuild b/academic/samtools/samtools.SlackBuild index 7efbaf3288..4f39dce0d0 100644 --- a/academic/samtools/samtools.SlackBuild +++ b/academic/samtools/samtools.SlackBuild @@ -25,14 +25,14 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=samtools -VERSION=${VERSION:-1.19.2} -HTSLIBV=${HTSLIBV:-1.19.1} +VERSION=${VERSION:-1.20} +HTSLIBV=${HTSLIBV:-1.20} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} -# Some applications still rely on the legacy samtools API instead of using htslib -# exclusively, in that case, install the headers in /usr/include/bam and the static +# Some applications still rely on the legacy samtools API instead of using htslib +# exclusively, in that case, install the headers in /usr/include/bam and the static # libbam library as well by declaring (uncommenting): #SAMLIB="yes" # and commenting out: @@ -122,9 +122,7 @@ find $PKG/usr/man -type f -exec gzip -9 {} \; for i in $( find $PKG/usr/man -type l ) ; do ln -s $( readlink $i ).gz $i.gz ; rm $i ; done mkdir -p $PKG/usr/doc/$PRGNAM-$VERSION -cp -a \ - AUTHORS LICENSE README NEWS.md examples \ - $PKG/usr/doc/$PRGNAM-$VERSION +cp -a AUTHORS LICENSE README NEWS.md examples $PKG/usr/doc/$PRGNAM-$VERSION cp $CWD/README $PKG/usr/doc/$PRGNAM-$VERSION cat $CWD/$PRGNAM.SlackBuild > $PKG/usr/doc/$PRGNAM-$VERSION/$PRGNAM.SlackBuild diff --git a/academic/samtools/samtools.info b/academic/samtools/samtools.info index eef9473b1e..40df7ba546 100644 --- a/academic/samtools/samtools.info +++ b/academic/samtools/samtools.info @@ -1,8 +1,8 @@ PRGNAM="samtools" -VERSION="1.19.2" +VERSION="1.20" HOMEPAGE="http://www.htslib.org" -DOWNLOAD="https://github.com/samtools/samtools/releases/download/1.19.2/samtools-1.19.2.tar.bz2" -MD5SUM="318492d95f5d8cef697442d1be996b77" +DOWNLOAD="https://github.com/samtools/samtools/releases/download/1.20/samtools-1.20.tar.bz2" +MD5SUM="e33f429b57324a55e5cbe0ef9f3a094e" DOWNLOAD_x86_64="" MD5SUM_x86_64="" REQUIRES="htslib" diff --git a/academic/smath-studio/smath-studio.SlackBuild b/academic/smath-studio/smath-studio.SlackBuild index 4b26c719c3..e6b4740429 100644 --- a/academic/smath-studio/smath-studio.SlackBuild +++ b/academic/smath-studio/smath-studio.SlackBuild @@ -25,7 +25,7 @@ cd $(dirname $0) ; CWD=$(pwd) PRGNAM=smath-studio -VERSION=${VERSION:-1.0.8348} +VERSION=${VERSION:-1.1.8763} BUILD=${BUILD:-1} TAG=${TAG:-_SBo} PKGTYPE=${PKGTYPE:-tgz} diff --git a/academic/smath-studio/smath-studio.desktop b/academic/smath-studio/smath-studio.desktop index 6b41e1fe8d..2af6903742 100644 --- a/academic/smath-studio/smath-studio.desktop +++ b/academic/smath-studio/smath-studio.desktop @@ -7,5 +7,5 @@ GenericName=Computer algebra system Comment=Symbolic computation software Icon=smath-studio Exec=smath-studio -Categories=Education; +Categories=Science;Education;Math MimeType= diff --git a/academic/smath-studio/smath-studio.info b/academic/smath-studio/smath-studio.info index bc40d92965..c10558c6b9 100644 --- a/academic/smath-studio/smath-studio.info +++ b/academic/smath-studio/smath-studio.info @@ -1,9 +1,9 @@ PRGNAM="smath-studio" -VERSION="1.0.8348" +VERSION="1.1.8763" HOMEPAGE="https://smath.info" -DOWNLOAD="https://smath.com/file/Lw2xA/SMathStudioDesktop.1_0_8348.Mono.tar.gz \ +DOWNLOAD="https://smath.info/en-US/files/Download/w3XHB/SMathStudioDesktop.1_1_8763.Mono.tar.gz \ http://ponce.cc/slackware/sources/repo/SMathStudio.Icons.zip" -MD5SUM="4ae9109f910c0085eeb8c193f3ad1c10 \ +MD5SUM="0e3c05eb81a82dbcce2ef04904624b2b \ 1dd3ff0477b5c3c57fb815320a387643" DOWNLOAD_x86_64="" MD5SUM_x86_64="" diff --git a/academic/stellarsolver/stellarsolver.info b/academic/stellarsolver/stellarsolver.info index e9d567c16f..106ea0e7ce 100644 --- a/academic/stellarsolver/stellarsolver.info +++ b/academic/stellarsolver/stellarsolver.info @@ -1,10 +1,10 @@ PRGNAM="stellarsolver" VERSION="2.4" HOMEPAGE="https://github.com/rlancaste/stellarsolver" -DOWNLOAD="https://github.com/rlancaste/stellarsolver/archive/2.4/stellarsolver-2.4.tar.gz" -MD5SUM="a4a92e7c2dc296d7fcbc814134d45886" -DOWNLOAD_x86_64="" -MD5SUM_x86_64="" +DOWNLOAD="UNSUPPORTED" +MD5SUM="" +DOWNLOAD_x86_64="https://github.com/rlancaste/stellarsolver/archive/2.4/stellarsolver-2.4.tar.gz" +MD5SUM_x86_64="a4a92e7c2dc296d7fcbc814134d45886" REQUIRES="wcslib" MAINTAINER="Edward W. Koenig" EMAIL="kingbeowulf@linuxgalaxy.org" |